Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACTCTGTATGCTAGC
..((((((((((..((......&))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020341
GeneSymbolPAK5
Binding site3795,3810
Score1.0
Seed1
Au0.676
Energy-15.4
Binding len15
Me-7.103
Phylopstem1.05719962
Phylopflank2.5458466137499998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure