Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCTGCCACGAAAACCCGGAGCAGCTGCGT
.(((((((((((((....(((&.))).....))))....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020341
GeneSymbolPAK5
Binding site24,57
Score0.923
Seed1
Au0.309
Energy-21.6
Binding len27
Me-4.762
Phylopstem3.0357658823529414
Phylopflank2.191476774565217
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure