Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGTTTTAATCTGCTTGGCAACCAGTGTAGCTGCT
..((((((((((((((.((((&.)))).))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020342
GeneSymbolSLC39A10
Binding site3950,3988
Score1.0
Seed1
Au0.662
Energy-24.5
Binding len24
Me-4.957
Phylopstem1.6847502352941177
Phylopflank0.8433959700000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure