Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCCCGCGGCTGCGGCGCAGG
((((.(((((((((((..(((&)))....))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020350
GeneSymbolAGTRAP
Binding site30,53
Score0.923
Seed0
Au0.265
Energy-23.0
Binding len23
Me-8.057
Phylopstem0.04879536363636367
Phylopflank0.7583833255555555
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure