Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATGCCCTCAGAACAGGCTGCAGGACTGTATGCCGGGC
.(((((((((((.(((((....&.)))))....))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020351
GeneSymbolCOL8A1
Binding site2348,2387
Score0.846
Seed1
Au0.471
Energy-23.1
Binding len22
Me-5.082
Phylopstem5.170134181818183
Phylopflank4.39346221875
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure