Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGGGAGGGGGCCCTGGGGA
...((((((..(((((((((.&))))))))).))...)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_020351
GeneSymbolCOL8A1
Binding site2948,2968
Score0.846
Seed0
Au0.412
Energy-24.4
Binding len20
Me-10.582
Phylopstem-0.10251176666666667
Phylopflank-0.07920380625
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end7
Position3UTR
2D Structure