Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTGCTGCCTGGCCCTCTGCAGCTGCT
..((((((((((..((.((((&.)))).))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020351
GeneSymbolCOL8A1
Binding site202,231
Score0.923
Seed1
Au0.441
Energy-25.1
Binding len22
Me-7.103
Phylopstem0.7311946600000001
Phylopflank1.1237117775
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure