Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCTGCAGCTGCT
..((((((((((((.......&)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020360
GeneSymbolPLSCR3
Binding site680,693
Score1.0
Seed1
Au0.353
Energy-22.4
Binding len13
Me-5.925
Phylopstem1.1509033333333334
Phylopflank2.50299375125
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure