Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAGCTGGTGCTTGCTGCGAT
(((((((..((((((.(((((&)))))))))))......))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020360
GeneSymbolPLSCR3
Binding site1623,1648
Score0.904
Seed1
Au0.426
Energy-22.2
Binding len25
Me-7.541
Phylopstem1.9165184285714287
Phylopflank0.8683264610000001
Longest consecutive pairings11
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure