Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTATAACAACCGCTATGCTGG
...((((.(((((((((((((&)))))....))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020361
GeneSymbolCPA6
Binding site322,347
Score0.846
Seed0
Au0.574
Energy-22.5
Binding len25
Me-8.828
Phylopstem0.23646329411764705
Phylopflank0.10785608125
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end8
PositionCDS
2D Structure