Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGCAGGGGCCAGGCAGCTGCT
..((((((((((((.(...((&))...).))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020361
GeneSymbolCPA6
Binding site248,270
Score0.846
Seed1
Au0.441
Energy-20.2
Binding len22
Me-5.692
Phylopstem0.03662178571428571
Phylopflank0.15306236250000005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure