Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTTGTGTAGGTGCCAGGG
.(((((((((((((.(......&).)))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020362
GeneSymbolPITHD1
Binding site908,928
Score0.846
Seed1
Au0.397
Energy-18.1
Binding len20
Me-4.529
Phylopstem0.2340898117647059
Phylopflank0.6341105250000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure