Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAGCCCAAGCGCTGCAAG
(((((((.((....((.((((&)))).))....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020368
GeneSymbolUTP3
Binding site657,678
Score0.846
Seed1
Au0.426
Energy-18.9
Binding len21
Me-14.569
Phylopstem2.5061565571428566
Phylopflank2.80409239375
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure