Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACAGTCACTGCAACTGCGAA
((((((.((((((((((....&))))...)))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020369
GeneSymbolFSCN3
Binding site222,243
Score0.846
Seed0
Au0.485
Energy-18.2
Binding len21
Me-5.481
Phylopstem0.9312717792307692
Phylopflank2.437610197875001
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end4
PositionCDS
2D Structure