Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAAGGAGGCGCCCGCGGCTGCAGA
((((((((((((.(((.....&.))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020372
GeneSymbolSLC22A17
Binding site6,32
Score0.923
Seed1
Au0.328
Energy-25.8
Binding len18
Me-5.227
Phylopstem1.2601699166666667
Phylopflank1.85588745
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure