Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAAGAACCCAGCTGGGAT
((.((((((.((((.(.((((&))))..).)))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020374
GeneSymbolC12orf4
Binding site430,452
Score0.923
Seed0
Au0.529
Energy-21.9
Binding len22
Me-7.473
Phylopstem-0.30965795
Phylopflank-0.0018692275000000355
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure