Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAAGCATCCCTGGCAGCTGTGAA
((((((((((((.(((..(((&)))...))).))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020374
GeneSymbolC12orf4
Binding site326,352
Score0.846
Seed1
Au0.559
Energy-20.0
Binding len26
Me-5.227
Phylopstem0.09964457333333332
Phylopflank-0.0010571300000000242
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure