Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCTTTCAGAAACTGGATTTAAACAAGCAGCAGCTGCT
..(((((((((.((((.....&.)))).).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020375
GeneSymbolTIGAR
Binding site145,185
Score0.954
Seed1
Au0.632
Energy-21.4
Binding len17
Me-8.304
Phylopstem3.2659356
Phylopflank2.7174737449000004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure