Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCCTGGTTGATGTCGGGC
.((((((((.((((...(((((&)))))...)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020379
GeneSymbolMAN1C1
Binding site2198,2219
Score0.923
Seed1
Au0.662
Energy-17.1
Binding len21
Me-6.004
Phylopstem6.0773025
Phylopflank5.037577573749999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure