Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCGGACGGCATGTGACGGTCCCGGCGGCCGCAGCGCGGG
((((.(((((((((((..((.&.)).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020379
GeneSymbolMAN1C1
Binding site635,677
Score0.923
Seed0
Au0.147
Energy-26.1
Binding len20
Me-8.057
Phylopstem0.12656666363636365
Phylopflank0.11564384125000006
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure