Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACCGCTGCTGTAT
.((((((.(((((.((.....&)).))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020383
GeneSymbolXPNPEP1
Binding site1120,1136
Score0.846
Seed1
Au0.412
Energy-19.4
Binding len16
Me-6.964
Phylopstem3.8637301666666666
Phylopflank5.073179614999999
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure