Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACGGTATCCAGGG
.(((((.((((..(((((....&)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020384
GeneSymbolCLDN2
Binding site1606,1621
Score0.923
Seed0
Au0.529
Energy-16.3
Binding len15
Me-9.973
Phylopstem-0.322110016
Phylopflank0.41282595275
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure