Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATAGCTGCACTGCTGCC
..((((((((((((((.....&)))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020384
GeneSymbolCLDN2
Binding site2352,2369
Score0.923
Seed1
Au0.441
Energy-19.1
Binding len17
Me-4.957
Phylopstem-0.03847621250000001
Phylopflank0.10400846025000003
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end3
Position3UTR
2D Structure