Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAAGGTCGGCAGCTGCGAG
((((((((((.(((((.....&))))...).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020386
GeneSymbolPLAAT1
Binding site222,242
Score0.846
Seed1
Au0.265
Energy-20.9
Binding len20
Me-6.762
Phylopstem-0.37830164
Phylopflank-0.22599575500000008
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure