Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTACAAGCGCCAAGTCTGTAT
.((((((((((.((((((((.&)))))))).)))..)).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020386
GeneSymbolPLAAT1
Binding site467,490
Score0.846
Seed1
Au0.5
Energy-20.2
Binding len23
Me-7.14
Phylopstem3.8641427692307695
Phylopflank3.363703942499999
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end7
PositionCDS
2D Structure