Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACAGCACCCCCACCTGCCAGAGCTGA
...(((((((((((((((((.&))))))))).........)))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020387
GeneSymbolRAB25
Binding site23,53
Score0.846
Seed0
Au0.412
Energy-18.3
Binding len30
Me-6.515
Phylopstem0.1646610413793104
Phylopflank0.4041793159615385
Longest consecutive pairings9
Position of longest consecutive pairings21
Pairings in 3prime end7
Position5UTR
2D Structure