Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACAGCAAAGCCGTTGACTGCT
..(((((.(((((((((((((&)))))))).....))))).).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020397
GeneSymbolCAMK1D
Binding site859,885
Score0.846
Seed0
Au0.471
Energy-22.5
Binding len26
Me-7.271
Phylopstem5.559793999999999
Phylopflank5.426438794499999
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end8
PositionCDS
2D Structure