Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCCCAGTTGTC
..(((((((.((((((.....&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020403
GeneSymbolPCDH9
Binding site2703,2717
Score1.0
Seed1
Au0.588
Energy-18.2
Binding len14
Me-6.2
Phylopstem5.625692028571429
Phylopflank4.982490491249998
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure