Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCATGTCCTCAGACCTGACCTTCAACTGCAGCTGG
...((((((((((((.(((((&.))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020405
GeneSymbolPLXDC1
Binding site1133,1172
Score0.846
Seed0
Au0.412
Energy-28.2
Binding len19
Me-6.748
Phylopstem0.353634075
Phylopflank0.37549111250000006
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure