Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATGTGCGAGGTGGGGCAGGTGTGTCAGGA
.((((((((((..(((......&.))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020406
GeneSymbolCD177
Binding site735,766
Score0.923
Seed1
Au0.426
Energy-18.5
Binding len16
Me-8.429
Phylopstem-0.666118
Phylopflank-0.419466593125
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure