Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTAAGAACACCAGCTGCGAC
(((((((((..(((.(.(((.&))).).)))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020406
GeneSymbolCD177
Binding site158,179
Score0.923
Seed1
Au0.368
Energy-22.3
Binding len21
Me-8.74
Phylopstem-0.964929711111111
Phylopflank-0.28849106374999994
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure