Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCACGACCGCAATGCAAG
(((((..((((((((((((((&))))).))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020416
GeneSymbolPPP2R2C
Binding site1785,1807
Score0.846
Seed0
Au0.471
Energy-25.9
Binding len22
Me-7.382
Phylopstem-0.3970645106666667
Phylopflank-0.3558841625
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end8
Position3UTR
2D Structure