Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGCCTCCACCCAGCTGCT
..(((((((.((..(((((((&)))))))..))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020421
GeneSymbolADCK1
Binding site1698,1720
Score0.846
Seed1
Au0.368
Energy-22.0
Binding len22
Me-8.345
Phylopstem-0.44602508999999996
Phylopflank-0.037706116374999966
Longest consecutive pairings7
Position of longest consecutive pairings15
Pairings in 3prime end7
Position3UTR
2D Structure