Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGCGCCGCGGCTCTGCT
..((((((((((.(((..(((&)))..)))))))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020421
GeneSymbolADCK1
Binding site32,53
Score0.846
Seed1
Au0.265
Energy-21.9
Binding len21
Me-6.246
Phylopstem-0.25594243333333333
Phylopflank0.7021916745833332
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end6
Position5UTR
2D Structure