Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCTGAAAGCTGCAGA
((((((((.(((((((.....&)))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020428
GeneSymbolSLC44A2
Binding site1661,1679
Score0.885
Seed1
Au0.485
Energy-20.7
Binding len18
Me-4.994
Phylopstem4.7159610999999995
Phylopflank4.307914507499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure