Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGCGGCAGCCAGGCTGCGAC
((((((((..((((((...((&))...)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020435
GeneSymbolGJC2
Binding site268,289
Score0.846
Seed1
Au0.368
Energy-21.6
Binding len21
Me-6.236
Phylopstem5.8142197499999995
Phylopflank5.27079445
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure