Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTCGGAGGAGGACCAGGGCGAGCAGCAGCCGCAGCAGCAGA
((((.(((((((((((.....&.))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020436
GeneSymbolSALL4
Binding site150,192
Score1.0
Seed0
Au0.279
Energy-26.3
Binding len18
Me-8.057
Phylopstem2.8210876363636364
Phylopflank1.72916419125
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end3
PositionCDS
2D Structure