Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTACGTGCCGTGGCTCTGTGCAGT
(((((((((((((((((.(((&))).)))).)))))))))....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020439
GeneSymbolCAMK1G
Binding site1809,1836
Score0.923
Seed1
Au0.412
Energy-21.4
Binding len27
Me-3.938
Phylopstem0.4879754863636363
Phylopflank0.5342389937500002
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end7
Position3UTR
2D Structure