Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGGCAGCGGCGCTGCGGC
(((((((.((.(((((..((.&)).))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020445
GeneSymbolACTR3B
Binding site10,29
Score0.846
Seed1
Au0.172
Energy-21.9
Binding len19
Me-9.076
Phylopstem0.7414008428571428
Phylopflank0.3786172935227273
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure