Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAACCGCCGTCTATCAGGCTGCGT
.(((((((((((((((.....&)))))))).........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020448
GeneSymbolNIPAL3
Binding site1110,1135
Score0.846
Seed1
Au0.456
Energy-22.2
Binding len25
Me-3.793
Phylopstem3.1981987833333334
Phylopflank3.9267697825
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end3
PositionCDS
2D Structure