Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCGACTCGTGACCAACATGCTGTGAT
(((((((((((((((((((((&)))))))))).))))........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020453
GeneSymbolATP10D
Binding site194,225
Score0.923
Seed1
Au0.485
Energy-22.4
Binding len31
Me-3.938
Phylopstem0.440992106
Phylopflank0.07634470950000001
Longest consecutive pairings10
Position of longest consecutive pairings21
Pairings in 3prime end8
Position5UTR
2D Structure