Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGACTGCCCAGCTGCAGC
(((((((((.(((.((..(((&)))...)).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020457
GeneSymbolTHAP11
Binding site652,674
Score1.0
Seed1
Au0.324
Energy-22.7
Binding len22
Me-6.037
Phylopstem1.6796385555555555
Phylopflank1.4479905881250001
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure