Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACAAGGTGTCAGGC
.((((((((....((((((...&))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020459
GeneSymbolPAIP2B
Binding site4689,4706
Score0.846
Seed1
Au0.485
Energy-18.4
Binding len17
Me-12.497
Phylopstem0.5836738125
Phylopflank0.37837489625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure