Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCTGCAGCCTCTGCTCTGCTGCC
..(((((.(((((((((((((&)))).)))))))...))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020459
GeneSymbolPAIP2B
Binding site4403,4429
Score0.923
Seed0
Au0.471
Energy-21.8
Binding len26
Me-7.271
Phylopstem0.15314043529411764
Phylopflank0.20404494250000002
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end8
Position3UTR
2D Structure