Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTGAACTGCAGCA
.....(((((((((..(((((&)))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020459
GeneSymbolPAIP2B
Binding site3246,3263
Score0.846
Seed0
Au0.544
Energy-21.6
Binding len17
Me-14.634
Phylopstem0.8671554444444445
Phylopflank0.17364365124999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure