Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTATACAAACCAAATGGCAGCTGTT
..(((((((((((((((.(((&))).))))).)).....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020459
GeneSymbolPAIP2B
Binding site6247,6273
Score1.0
Seed1
Au0.712
Energy-20.0
Binding len26
Me-4.957
Phylopstem0.046205766666666696
Phylopflank0.8499982988157895
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure