Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCTCTGTGCAGTTCCGTCAGCTGCAGCTGTT
..(((((((((((((...((.&.))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020461
GeneSymbolTUBGCP6
Binding site5535,5570
Score1.0
Seed1
Au0.426
Energy-25.1
Binding len19
Me-5.19
Phylopstem-0.45587746153846165
Phylopflank0.41672819525000004
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure