Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTCTGCGGCTGCAGG
((((((((((((..((.....&))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020478
GeneSymbolANK1
Binding site1858,1875
Score0.923
Seed1
Au0.397
Energy-23.3
Binding len17
Me-6.084
Phylopstem1.7671999999999999
Phylopflank0.63027426425
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure