Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCTCCGTGGCTTGCC
..((((((((((..(.((((.&))))).)))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020485
GeneSymbolRHCE
Binding site903,921
Score0.923
Seed1
Au0.397
Energy-18.0
Binding len18
Me-7.336
Phylopstem2.116113
Phylopflank1.4043175050000007
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure