Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCTGCAGGCCCAGCTGCAGG
(((((((((.(((((((.(((&)))..))))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020524
GeneSymbolPBXIP1
Binding site915,938
Score0.923
Seed1
Au0.397
Energy-23.3
Binding len23
Me-5.18
Phylopstem-0.3749120444444445
Phylopflank-0.008409731500000073
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure